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SRX9233730: RNA-Seq of Pseudochorthippus parallelus erythropus: adult male
1 ILLUMINA (Illumina HiSeq 2500) run: 27.4M spots, 8.2G bases, 3.1Gb downloads

Design: Tissue samples were preserved in RNAlater (Qiagen). To sample the largest variety of transcripts possible, we extracted total RNA from whole body, after removing the head and digestive tract of each individual to avoid over-representation of eye pigments and gut contaminants. We homogenized the samples using ceramic beads 1.4/2.8mm (Precellys and the standard Tri-Reagent protocol (Sigma). Resuspended RNA pellets were purified with RNAeasy Mini columns (Qiagen), and final sample integrity and quantity was assessed with an Agilent 2100 BioAnalyzer. Enrichment for mRNA, library construction, and paired end Illumina HiSeq2500 sequencing was performed by the BGI.
Submitted by: Ludwig-Maximilian University of Munich
Study: Historical isolation facilitates species radiation by sexual selection: Insights from Chorthippus grasshoppers
show Abstracthide Abstract
Theoretical and empirical studies have shown that species radiations are facilitated when a trait under divergent natural selection is also involved in sexual selection. It is yet unclear how quick and effective radiations are where assortative mating is unrelated to the ecological environment and primarily results from sexual selection. We address this question using sympatric grasshopper species of the genus Chorthippus, which have evolved strong behavioral isolation while lacking noticeable eco-morphological divergence. Mitochondrial genomes suggest that the radiation is relatively recent, dating to the mid-Pleistocene, which leads to extensive incomplete lineage sorting throughout the mitochondrial and the nuclear genomes. Nuclear data shows that hybrids are absent in sympatric localities but that all species have experienced gene flow, confirming that reproductive isolation is strong but remains incomplete. Demographic modelling is most consistent with a long period of geographic isolation, followed by secondary contact and extensive introgression. Such initial periods of geographic isolation might facilitate the association between male signaling and female preference, permitting the coexistence of sympatric species that are genetically, morphologically, and ecologically similar, but otherwise behave mostly as good biological species.
Sample: Pseudochorthippus parallelus erythropus male, alternate code Cpe_348bie
SAMN16264391 • SRS7467159 • All experiments • All runs
Library:
Name: Cpe_348bie
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 27.4M spots, 8.2G bases, 3.1Gb
Run# of Spots# of BasesSizePublished
SRR1276298427,406,5548.2G3.1Gb2020-10-05

ID:
12039781

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